Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 1 curated entries in PaperBLAST's database that match '2,4-diketo-3-deoxy-L-rhamnonate hydrolase' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
HSERO_RS06355: ureidoglycolate lyase is similar to: | PaperBLAST |
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans | 77% id, 100% cov |
HSERO_RS17860: 5-carboxymethyl-2-hydroxymuconate isomerase is similar to: | PaperBLAST |
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans | 34% id, 75% cov |
HSERO_RS05065: 2-keto-4-pentenoate hydratase is similar to: | PaperBLAST |
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans | 26% id, 84% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory