Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 3 curated entries in PaperBLAST's database that match '2-deoxy-D-ribonate 3-dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 34 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS17235: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 51% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 49% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 48% id, 95% cov |
| HSERO_RS11255: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 34% id, 93% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 93% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 93% cov |
| HSERO_RS19365: oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 33% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 31% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 94% cov |
| HSERO_RS12375: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 97% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 99% cov |
| HSERO_RS12955: short-chain dehydrogenase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 98% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 94% cov |
| HSERO_RS05240: short-chain dehydrogenase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 32% id, 95% cov |
| HSERO_RS19730: short-chain dehydrogenase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 32% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 95% cov |
| HSERO_RS05890: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 32% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 94% cov |
| HSERO_RS22475: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 31% id, 97% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 28% id, 97% cov |
| HSERO_RS02915: short-chain dehydrogenase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 96% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 98% cov |
| HSERO_RS22235: short-chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 96% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 29% id, 96% cov |
| HSERO_RS06350: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
| HSERO_RS05565: short-chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 94% cov |
| HSERO_RS16605: oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 96% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 29% id, 96% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 96% cov |
| HSERO_RS18690: short-chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
| HSERO_RS02925: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 93% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 93% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 92% cov |
| HSERO_RS19050: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 95% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 29% id, 94% cov |
| HSERO_RS05480: gluconate 5-dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
| HSERO_RS22305: oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 95% cov |
| HSERO_RS17460: oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 93% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 93% cov |
| HSERO_RS20035: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 94% cov |
| HSERO_RS02535: short-chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 94% cov |
| HSERO_RS04630: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 92% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 92% cov |
| HSERO_RS08965: sugar dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 93% cov |
| HSERO_RS19055: oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 28% id, 94% cov |
| HSERO_RS12025: enoyl-ACP reductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 27% id, 96% cov |
| HSERO_RS12220: dehydrogenase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 84% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 27% id, 89% cov |
| HSERO_RS05340: short-chain dehydrogenase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 25% id, 94% cov |
| HSERO_RS05295: short-chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 33% id, 71% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 71% cov |
| HSERO_RS21755: short-chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 75% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 70% cov |
| HSERO_RS12055: AraC family transcriptional regulator is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 27% id, 84% cov |
| HSERO_RS23160: short-chain dehydrogenase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 28% id, 80% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 68% cov |
| HSERO_RS11540: short-chain dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 71% cov |
| HSERO_RS23155: AraC family transcriptional regulator is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 30 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory