Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 6 curated entries in PaperBLAST's database that match 'D-alanine%dehydrogenase' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS08375: D-amino acid dehydrogenase small subunit is similar to: | PaperBLAST |
DADA_KLEAE / O30745: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes | 68% id, 100% cov |
DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli | 69% id, 98% cov |
DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa | 66% id, 100% cov |
| HSERO_RS07275: D-amino acid dehydrogenase is similar to: | PaperBLAST |
Ac3H11_4848: D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp. | 47% id, 99% cov |
DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa | 43% id, 99% cov |
AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense | 42% id, 97% cov |
| HSERO_RS01605: amino acid dehydrogenase is similar to: | PaperBLAST |
Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri | 37% id, 96% cov |
DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa | 36% id, 94% cov |
AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense | 36% id, 93% cov |
| HSERO_RS11185: amino acid dehydrogenase is similar to: | PaperBLAST |
DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa | 35% id, 95% cov |
Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri | 34% id, 95% cov |
DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli | 32% id, 94% cov |
| HSERO_RS22955: D-amino acid dehydrogenase is similar to: | PaperBLAST |
AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense | 27% id, 95% cov |
DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa | 26% id, 96% cov |
Ac3H11_4848: D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp. | 25% id, 96% cov |
| HSERO_RS05695: D-amino acid oxidase is similar to: | PaperBLAST |
AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense | 25% id, 55% cov |
Ac3H11_4848: D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp. | 25% id, 36% cov |
AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense | 59% id, 7% cov |
| HSERO_RS13205: 2-polyprenyl-6-methoxyphenol hydroxylase is similar to: | PaperBLAST |
DADA_ECOLI / P0A6J5: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli | 37% id, 12% cov |
| HSERO_RS19590: dihydropyrimidine dehydrogenase subunit A is similar to: | PaperBLAST |
DADA_KLEAE / O30745: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes | 48% id, 7% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory