Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 3 curated entries in PaperBLAST's database that match 'IGP synthase, amidotransferase subunit' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS20325: imidazole glycerol phosphate synthase is similar to: | PaperBLAST |
HSERO_RS20325: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Herbaspirillum seropedicae | 100% id, 100% cov |
DvMF_2305: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 40% id, 95% cov |
DVU0285: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 39% id, 94% cov |
| HSERO_RS21015: imidazole glycerol phosphate synthase is similar to: | PaperBLAST |
HSERO_RS20325: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Herbaspirillum seropedicae | 38% id, 97% cov |
DVU0285: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 35% id, 95% cov |
DvMF_2305: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 34% id, 95% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory