Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%small' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS06920: carbamoyl phosphate synthase small subunit is similar to: | PaperBLAST |
carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum | 44% id, 53% cov |
carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum | 41% id, 41% cov |
| HSERO_RS11020: GMP synthase is similar to: | PaperBLAST |
carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum | 25% id, 52% cov |
| HSERO_RS02525: glutamine amidotransferase is similar to: | PaperBLAST |
carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum | 30% id, 37% cov |
| HSERO_RS19440: anthranilate synthase subunit II is similar to: | PaperBLAST |
carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum | 26% id, 37% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory