Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 4 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit B' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS23300: glutamyl-tRNA amidotransferase subunit B is similar to: | PaperBLAST |
GATB_ARATH / Q9FV81: Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Glu-AdT subunit B; EC 6.3.5.- from Arabidopsis thaliana | 45% id, 87% cov |
GATB_HUMAN / O75879: Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112 homolog; EC 6.3.5.- from Homo sapiens | 40% id, 89% cov |
GATB_YEAST / P33893: Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112; EC 6.3.5.- from Saccharomyces cerevisiae | 32% id, 93% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 5347554-5349062 (frame -3) on NC_014323 is similar to: | PaperBLAST |
GATB_ARATH / Q9FV81: Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Glu-AdT subunit B; EC 6.3.5.- from Arabidopsis thaliana | 45% id, 91% cov |
GATB_HUMAN / O75879: Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112 homolog; EC 6.3.5.- from Homo sapiens | 39% id, 91% cov |
Lawrence Berkeley National Laboratory