Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 1 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit D' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS19635: L-asparaginase is similar to: | PaperBLAST |
gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus | 29% id, 78% cov |
| HSERO_RS07255: glutaminase is similar to: | PaperBLAST |
gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus | 28% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4503990-4505114 (frame +3) on NC_014323 is similar to: | PaperBLAST |
gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus | 29% id, 82% cov |
Lawrence Berkeley National Laboratory