Curated BLAST

Curated BLAST for Genomes

Found 6 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query

HSERO_RS05650: FAD-dependent oxidoreductase is similar to:	PaperBLAST
Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens	33% id, 100% cov
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens	33% id, 98% cov
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli	32% id, 99% cov

HSERO_RS01275: FAD-dependent oxidoreductase is similar to:	PaperBLAST
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli	33% id, 98% cov
Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens	33% id, 99% cov
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens	32% id, 95% cov

HSERO_RS05840: FAD-dependent oxidoreductase is similar to:	PaperBLAST
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens	33% id, 98% cov
Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens	32% id, 98% cov
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli	31% id, 100% cov

HSERO_RS11085: L-aspartate oxidase is similar to:	PaperBLAST
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli	31% id, 21% cov

HSERO_RS20960: oxygenase is similar to:	PaperBLAST
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens	41% id, 9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory