Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 3 curated entries in PaperBLAST's database that match 'sorbitol-6-phosphate dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 25 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS22235: short-chain dehydrogenase is similar to: | PaperBLAST |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 33% id, 99% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 31% id, 98% cov |
| HSERO_RS08965: sugar dehydrogenase is similar to: | PaperBLAST |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 33% id, 98% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 31% id, 98% cov |
| HSERO_RS19730: short-chain dehydrogenase is similar to: | PaperBLAST |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 33% id, 98% cov |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 32% id, 98% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 31% id, 98% cov |
| HSERO_RS09605: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 33% id, 98% cov |
| HSERO_RS19055: oxidoreductase is similar to: | PaperBLAST |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 32% id, 98% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 32% id, 98% cov |
| HSERO_RS05565: short-chain dehydrogenase is similar to: | PaperBLAST |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 31% id, 99% cov |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 30% id, 99% cov |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 29% id, 96% cov |
| HSERO_RS04630: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 33% id, 94% cov |
| HSERO_RS19455: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 31% id, 98% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 30% id, 98% cov |
| HSERO_RS02915: short-chain dehydrogenase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 32% id, 96% cov |
| HSERO_RS20035: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase is similar to: | PaperBLAST |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 30% id, 98% cov |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 30% id, 92% cov |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 27% id, 98% cov |
| HSERO_RS21730: short-chain dehydrogenase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 30% id, 97% cov |
| HSERO_RS17235: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 30% id, 98% cov |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 29% id, 98% cov |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 27% id, 97% cov |
| HSERO_RS02925: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 30% id, 95% cov |
| HSERO_RS12375: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 30% id, 95% cov |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 25% id, 98% cov |
| HSERO_RS01475: oxidoreductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 31% id, 92% cov |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 27% id, 67% cov |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 26% id, 67% cov |
| HSERO_RS17460: oxidoreductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 30% id, 96% cov |
| HSERO_RS11255: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 29% id, 97% cov |
| HSERO_RS05890: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 32% id, 89% cov |
| HSERO_RS19050: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 29% id, 96% cov |
| HSERO_RS06765: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli | 28% id, 99% cov |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 28% id, 95% cov |
| HSERO_RS05480: gluconate 5-dehydrogenase is similar to: | PaperBLAST |
srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora | 28% id, 98% cov |
| HSERO_RS06350: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 26% id, 97% cov |
| HSERO_RS21755: short-chain dehydrogenase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 29% id, 74% cov |
| HSERO_RS05330: glucose dehydrogenase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 27% id, 69% cov |
| HSERO_RS23160: short-chain dehydrogenase is similar to: | PaperBLAST |
srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans | 26% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 24 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory