Searching in Escherichia coli BW25113 (Keio)
Found 12 curated entries in PaperBLAST's database that match '1.1.1.282' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Escherichia coli BW25113, or try another query
b1692: quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) is similar to: | PaperBLAST |
YDIB_ECOLI / P0A6D5: Quinate/shikimate dehydrogenase; NAD-dependent shikimate 5-dehydrogenase; EC 1.1.1.282 from Escherichia coli | 100% id, 100% cov |
Q88K85: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida | 32% id, 93% cov |
qutB / P25415: quinate dehydrogenase (EC 1.1.1.282) from Emericella nidulans | 30% id, 92% cov |
b3281: dehydroshikimate reductase, NAD(P)-binding (NCBI) is similar to: | PaperBLAST |
Q88JP1: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida | 32% id, 97% cov |
Q88K85: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida | 29% id, 93% cov |
YDIB_ECOLI / P0A6D5: Quinate/shikimate dehydrogenase; NAD-dependent shikimate 5-dehydrogenase; EC 1.1.1.282 from Escherichia coli | 28% id, 92% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory