Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Escherichia coli BW25113, or try another query

b3012: orf, hypothetical protein (VIMSS)
is similar to:
PaperBLAST

P87039: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis
C1K8Y9: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis

38% id,
96% cov

A9QVV8: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis

37% id,
96% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

36% id,
96% cov

More...

b0207: 2,5-diketo-D-gluconate reductase B (NCBI)
is similar to:
PaperBLAST

I7HD84: D-xylose reductase (EC 1.1.1.307) from Rhizomucor pusillus

35% id,
92% cov

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus

34% id,
93% cov

A0A0M4HL56: D-xylose reductase (EC 1.1.1.307) from Debaryomyces nepalensis

32% id,
94% cov

More...

b1771: predicted oxidoreductase (NCBI)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

35% id,
88% cov

M9RYL7: D-xylose reductase (EC 1.1.1.307) from Kazachstania humilis

22% id,
96% cov

b3001: aldo-keto reductase (NCBI)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

29% id,
93% cov

b0419: putative NAD(P)H-dependent xylose reductase (VIMSS)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

29% id,
91% cov

b2834: predicted oxidoreductase, NADP(H)-dependent aldo-keto reductase (NCBI)
is similar to:
PaperBLAST

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

29% id,
92% cov

P87039: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis
C1K8Y9: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis

28% id,
90% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

29% id,
88% cov

More...

b1781: predicted oxidoreductase (NCBI)
is similar to:
PaperBLAST

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

27% id,
91% cov

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

34% id,
64% cov

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus

27% id,
46% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory