Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 44 curated entries in PaperBLAST's database that match '1.1.1.44' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Escherichia coli BW25113, or try another query

b2029: 6-phosphogluconate dehydrogenase (NCBI)
is similar to:
PaperBLAST

6PGD_ECOLI / P00350: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Escherichia coli
Gnd / b2029: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli
gnd / P00350: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli
P00350: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Escherichia coli

100% id,
100% cov

Q762L5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Klebsiella pneumoniae

96% id,
100% cov

6PGD_BACSU / P80859: 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; GNTZII; EC 1.1.1.44 from Bacillus subtilis
gndA / P80859: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) from Bacillus subtilis
P80859: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Bacillus subtilis

70% id,
100% cov

More...

b0509: tartronate semialdehyde reductase, NADH-dependent (NCBI)
is similar to:
PaperBLAST

6PGD2_ARATH / Q9FWA3: 6-phosphogluconate dehydrogenase, decarboxylating 2; EC 1.1.1.44 from Arabidopsis thaliana
Q9FWA3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana

26% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory