Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.58' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Escherichia coli BW25113, or try another query

b1521: tagaturonate reductase (NCBI)
is similar to:
PaperBLAST

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

100% id,
100% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

41% id,
99% cov

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

37% id,
95% cov

b2172: predicted dehydrogenase, NAD-dependent (NCBI)
is similar to:
PaperBLAST

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

27% id,
96% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

26% id,
96% cov

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

22% id,
97% cov

b4323: D-mannonate oxidoreductase, NAD-binding (NCBI)
is similar to:
PaperBLAST

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

27% id,
96% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

26% id,
94% cov

b1542: predicted mannonate dehydrogenase (NCBI)
is similar to:
PaperBLAST

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

25% id,
97% cov

A9QSF6: tagaturonate reductase (EC 1.1.1.58) from Lactococcus lactis

24% id,
97% cov

UxaB / b1521: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC 1.1.1.58) from Escherichia coli

28% id,
74% cov

b3600: mannitol-1-phosphate 5-dehydrogenase (NCBI)
is similar to:
PaperBLAST

CA265_RS19880: Altronate oxidoreductase (EC 1.1.1.58) from Pedobacter sp.

24% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory