Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 33 curated entries in PaperBLAST's database that match '1.1.1.95' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Escherichia coli BW25113, or try another query

b2913: D-3-phosphoglycerate dehydrogenase (NCBI) is similar to:	PaperBLAST
SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli serA / RF\|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli	100% id, 100% cov
U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii	49% id, 92% cov
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	48% id, 88% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	47% id, 88% cov
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis	52% id, 64% cov
Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii	34% id, 93% cov
O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii	31% id, 92% cov
EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica	28% id, 94% cov
PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis	27% id, 97% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	33% id, 68% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	30% id, 68% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	35% id, 58% cov
SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus	35% id, 58% cov
SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus	35% id, 58% cov
SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	31% id, 65% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	36% id, 50% cov
SERA2_ARATH / O04130: D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana O04130: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	34% id, 51% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	31% id, 57% cov
More...

b3553: putative dehydrogenase (VIMSS) is similar to:	PaperBLAST
O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii	30% id, 97% cov
EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica	23% id, 99% cov
Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis	30% id, 73% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	36% id, 59% cov
U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii	27% id, 73% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	34% id, 59% cov
SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli serA / RF\|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli	29% id, 67% cov
SERA2_ARATH / O04130: D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana O04130: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	34% id, 51% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	33% id, 53% cov
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	32% id, 54% cov
SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus	31% id, 56% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	31% id, 56% cov
SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus	31% id, 56% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	34% id, 51% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	31% id, 54% cov
SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	29% id, 53% cov
More...

b1380: D-lactate dehydrogenase (NCBI) is similar to:	PaperBLAST
Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii	27% id, 98% cov
O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii	33% id, 79% cov
EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica	29% id, 78% cov
PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis	33% id, 62% cov
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	28% id, 70% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	27% id, 70% cov
SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli serA / RF\|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli	29% id, 59% cov
U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii	26% id, 60% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	32% id, 47% cov
SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	31% id, 47% cov
SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus	28% id, 52% cov
SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus	28% id, 52% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	28% id, 52% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	33% id, 44% cov
Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis	28% id, 51% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	28% id, 51% cov
SERA2_ARATH / O04130: D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana O04130: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	31% id, 44% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	35% id, 37% cov
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis	26% id, 45% cov
More...

b1033: putative dehydrogenase (VIMSS) is similar to:	PaperBLAST
Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis	30% id, 83% cov
O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii	30% id, 77% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	29% id, 47% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	27% id, 49% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	27% id, 47% cov
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	23% id, 48% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	23% id, 48% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	34% id, 29% cov
More...

b2320: erythronate-4-phosphate dehydrogenase (NCBI) is similar to:	PaperBLAST
EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica	27% id, 81% cov
O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii	27% id, 75% cov
SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli serA / RF\|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli	28% id, 72% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	32% id, 63% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	30% id, 55% cov
SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus	29% id, 54% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	28% id, 54% cov
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis	26% id, 59% cov
SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus	28% id, 54% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	31% id, 49% cov
Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis	27% id, 51% cov
More...

b2979: glycolate oxidase subunit, FAD-linked (NCBI) is similar to:	PaperBLAST
HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae	26% id, 25% cov
BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans	30% id, 12% cov
HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae	37% id, 7% cov
BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans	37% id, 6% cov
More...

b0325: predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) is similar to:	PaperBLAST
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	34% id, 12% cov

b4467: glycolate oxidase iron-sulfur subunit (NCBI) is similar to:	PaperBLAST
BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans	26% id, 7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory