Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 15 curated entries in PaperBLAST's database that match '1.1.2.8'.

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b0124: glucose dehydrogenase (NCBI)
is similar to:
PaperBLAST

B1N7J5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

23% id,
96% cov

Q88JH5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

26% id,
68% cov

B1N7J0: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

26% id,
69% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory