Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 42 curated entries in PaperBLAST's database that match '1.1.99.2'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Escherichia coli BW25113, or try another query

b2660: orf, hypothetical protein (VIMSS)
is similar to:
PaperBLAST

L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Indibacter alkaliphilus

42% id,
97% cov

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) from Homo sapiens

42% id,
89% cov

L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Achromobacter aegrifaciens

30% id,
73% cov

More...

b0311: choline dehydrogenase (NCBI)
is similar to:
PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

40% id,
98% cov

PDH2_LEUMG / Q3L243: Pyranose dehydrogenase 2; PDH 2; Pyranose:quinone oxidoreductase 2; EC 1.1.99.29 from Leucoagaricus meleagris
Q3L243: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

30% id,
93% cov

PDH1_AGABI / Q3L1D1: Pyranose dehydrogenase; PDH; Glucose dehydrogenase; GDH; Pyranose 2-dehydrogenase; Pyranose:quinone oxidoreductase; EC 1.1.99.29 from Agaricus bisporus
Q3L1D1: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus bisporus

29% id,
93% cov

More...

b0124: glucose dehydrogenase (NCBI)
is similar to:
PaperBLAST

Q70JN9: gluconate 5-dehydrogenase (EC 1.1.1.69); D-sorbitol dehydrogenase (acceptor) (subunit 1/2) (EC 1.1.99.21) from Gluconobacter oxydans

38% id,
88% cov

Q70JP0: gluconate 5-dehydrogenase (EC 1.1.1.69); D-sorbitol dehydrogenase (acceptor) (subunit 2/2) (EC 1.1.99.21) from Gluconobacter oxydans

37% id,
90% cov

sldA / Q8KIL1: D-sorbitol dehydrogenase large subunit (EC 1.1.99.21) from Gluconobacter thailandicus

37% id,
90% cov

More...

b2453: ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase (VIMSS)
is similar to:
PaperBLAST

W4G0G7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces astaci

29% id,
91% cov

A0A024TMA3: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces invadans

28% id,
91% cov

S5YSM1: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Bemisia tabaci

29% id,
85% cov

More...

b3589: predicted Fe-containing alcohol dehydrogenase (NCBI)
is similar to:
PaperBLAST

A0A0L0DHP5: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Thecamonas trahens

26% id,
98% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

27% id,
90% cov

T0Q1Z2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia diclina

27% id,
88% cov

More...

b2799: L-1,2-propanediol oxidoreductase (NCBI)
is similar to:
PaperBLAST

T0Q1Z2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia diclina

27% id,
92% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

27% id,
92% cov

A0A0L0DHP5: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Thecamonas trahens

27% id,
91% cov

More...

b1315: predicted oxidoreductase, NADH-binding (NCBI)
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

28% id,
78% cov

b1241: fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI)
is similar to:
PaperBLAST

X6NPJ7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Reticulomyxa filosa

26% id,
81% cov

HOT_HUMAN / Q8IWW8: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; Fe-containing alcohol dehydrogenase; EC 1.1.99.24 from Homo sapiens
Q8IWW8: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Homo sapiens

26% id,
78% cov

S5YSM1: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Bemisia tabaci

26% id,
73% cov

More...

b3011: alcohol dehydrogenase, NAD(P)-dependent (NCBI)
is similar to:
PaperBLAST

X6NPJ7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Reticulomyxa filosa

22% id,
82% cov

A0A0L0DHP5: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Thecamonas trahens

29% id,
43% cov

b4280: putative dehydrogenase (VIMSS)
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

28% id,
54% cov

b3440: predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain (NCBI)
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

25% id,
45% cov

b1624: orf, hypothetical protein (VIMSS)
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

24% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory