Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 6 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b2660: orf, hypothetical protein (VIMSS)
is similar to:

L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC from Indibacter alkaliphilus

42% id,
97% cov

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC from Homo sapiens

42% id,
89% cov

L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC from Achromobacter aegrifaciens

30% id,
73% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory