Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Escherichia coli BW25113, or try another query

b3433: aspartate-semialdehyde dehydrogenase (NCBI)
is similar to:
PaperBLAST

DHAS_ECOLI / P0A9Q9: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Escherichia coli
Dap / b3433: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Escherichia coli
asd / P0A9Q9: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Escherichia coli

100% id,
100% cov

DHAS_SALTY / P0A1F8: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Salmonella typhimurium

96% id,
100% cov

C5BB06: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Edwardsiella ictaluri

82% id,
100% cov

More...

b2319: hypothetical protein (NCBI)
is similar to:
PaperBLAST

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae

48% id,
100% cov

DHAS_MYCTU / P9WNX5: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Mycobacterium tuberculosis
P9WNX5: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Mycobacterium tuberculosis

32% id,
99% cov

Q8KQ27: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Streptomyces clavuligerus

33% id,
98% cov

More...

b3958: N-acetyl-gamma-glutamyl-phosphate reductase (NCBI)
is similar to:
PaperBLAST

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Bacillus subtilis

28% id,
47% cov

Q8KQ27: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Streptomyces clavuligerus

26% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory