Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 13 curated entries in PaperBLAST's database that match '1.2.1.39'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Escherichia coli BW25113, or try another query

b1385: phenylacetaldehyde dehydrogenase (VIMSS)
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

100% id,
100% cov

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

46% id,
97% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

46% id,
96% cov

More...

b3588: aldehyde dehydrogenase B (lactaldehyde dehydrogenase) (VIMSS)
is similar to:
PaperBLAST

pedI / B1N7J6: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

66% id,
99% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

43% id,
92% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

40% id,
96% cov

More...

b1300: gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent (NCBI)
is similar to:
PaperBLAST

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

44% id,
96% cov

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

41% id,
98% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

40% id,
100% cov

More...

b0312: betaine aldehyde dehydrogenase, NAD-dependent (NCBI)
is similar to:
PaperBLAST

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

41% id,
97% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

43% id,
93% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

41% id,
96% cov

More...

b1444: medium chain aldehyde dehydrogenase (NCBI)
is similar to:
PaperBLAST

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

41% id,
98% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

40% id,
96% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

38% id,
96% cov

More...

b2661: succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI)
is similar to:
PaperBLAST

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

40% id,
97% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

40% id,
96% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

39% id,
96% cov

More...

b1415: aldehyde dehydrogenase A, NAD-linked (NCBI)
is similar to:
PaperBLAST

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

36% id,
92% cov

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

33% id,
99% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

34% id,
96% cov

More...

b1525: putative aldehyde dehydrogenase (VIMSS)
is similar to:
PaperBLAST

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

33% id,
95% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

32% id,
91% cov

pedI / B1N7J6: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

31% id,
89% cov

More...

b1746: succinylglutamic semialdehyde dehydrogenase (NCBI)
is similar to:
PaperBLAST

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

31% id,
93% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

30% id,
92% cov

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

30% id,
92% cov

More...

b1014: fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (NCBI)
is similar to:
PaperBLAST

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

30% id,
97% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

30% id,
96% cov

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

30% id,
94% cov

More...

b2455: predicted aldehyde dehydrogenase, ethanolamine utilization protein (NCBI)
is similar to:
PaperBLAST

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

25% id,
78% cov

b1241: fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI)
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

19% id,
82% cov

BALDH_ANTMA / C7A2A0: Benzaldehyde dehydrogenase, mitochondrial; 2-phenylacetaldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.28; EC 1.2.1.39; EC 1.2.1.3 from Antirrhinum majus

22% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory