Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 21 curated entries in PaperBLAST's database that match '1.3.8.5' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Escherichia coli BW25113, or try another query

b1695: putative oxidoreductase (VIMSS) is similar to:	PaperBLAST
Pf6N2E2_1146: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	33% id, 99% cov
AO356_26355: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	33% id, 99% cov
Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	32% id, 98% cov
AO353_25680: 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) from Pseudomonas fluorescens	32% id, 99% cov
SO1679: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Shewanella oneidensis	32% id, 98% cov
Ac3H11_2996: 2-methyl-branched-chain-enoyl-CoA reductase (EC 1.3.8.5) from Acidovorax sp.	31% id, 99% cov
PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	31% id, 100% cov
PfGW456L13_2983: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	33% id, 92% cov
Pf1N1B4_4787: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	33% id, 92% cov
acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis	30% id, 99% cov
Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	30% id, 98% cov
O16843: short-chain 2-methylacyl-CoA dehydrogenase (EC 1.3.8.5) from Ascaris suum	31% id, 92% cov
MBCD_SOLTU / Q9FS88: 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum	30% id, 92% cov
ACAD8_HUMAN / Q9UKU7: Isobutyryl-CoA dehydrogenase, mitochondrial; IBDH; Activator-recruited cofactor 42 kDa component; ARC42; Acyl-CoA dehydrogenase family member 8; ACAD-8; EC 1.3.8.5 from Homo sapiens	29% id, 84% cov
ACDSB_HUMAN / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Homo sapiens ACADSB / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) from Homo sapiens	27% id, 87% cov
ACDSB_RAT / P70584: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Rattus norvegicus Acadsb / P70584: 2-methyl branched chain acyl-CoA dehydrogenase subunit (EC 1.3.8.5) from Rattus norvegicus	27% id, 87% cov
More...

b0039: crotonobetaine reductase subunit II, FAD-binding (NCBI) is similar to:	PaperBLAST
Pf1N1B4_4787: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	32% id, 99% cov
PfGW456L13_2983: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	32% id, 99% cov
AO353_25680: 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) from Pseudomonas fluorescens	31% id, 99% cov
Pf6N2E2_1146: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	31% id, 99% cov
AO356_26355: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	31% id, 99% cov
PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	31% id, 99% cov
SO1679: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Shewanella oneidensis	31% id, 98% cov
Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	30% id, 98% cov
Ac3H11_2996: 2-methyl-branched-chain-enoyl-CoA reductase (EC 1.3.8.5) from Acidovorax sp.	29% id, 99% cov
MBCD_SOLTU / Q9FS88: 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum	30% id, 92% cov
PfGW456L13_2985: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 99% cov
AO353_25670: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 99% cov
Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	27% id, 98% cov
O16843: short-chain 2-methylacyl-CoA dehydrogenase (EC 1.3.8.5) from Ascaris suum	29% id, 92% cov
PS417_13840: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	27% id, 99% cov
acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis	28% id, 90% cov
ACAD8_HUMAN / Q9UKU7: Isobutyryl-CoA dehydrogenase, mitochondrial; IBDH; Activator-recruited cofactor 42 kDa component; ARC42; Acyl-CoA dehydrogenase family member 8; ACAD-8; EC 1.3.8.5 from Homo sapiens	26% id, 91% cov
ACDSB_HUMAN / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Homo sapiens ACADSB / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) from Homo sapiens	27% id, 87% cov
ACDSB_RAT / P70584: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Rattus norvegicus Acadsb / P70584: 2-methyl branched chain acyl-CoA dehydrogenase subunit (EC 1.3.8.5) from Rattus norvegicus	26% id, 87% cov
More...

b0221: putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) is similar to:	PaperBLAST
acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis	27% id, 99% cov
PS417_13840: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	27% id, 96% cov
PfGW456L13_2983: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	27% id, 96% cov
Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	26% id, 96% cov
AO353_25670: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	26% id, 96% cov
PfGW456L13_2985: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	25% id, 96% cov
AO353_25680: 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) from Pseudomonas fluorescens	26% id, 90% cov
PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	26% id, 90% cov
AO356_26355: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	25% id, 90% cov
Pf1N1B4_4787: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	26% id, 86% cov
Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	25% id, 91% cov
Pf6N2E2_1146: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	25% id, 90% cov
MBCD_SOLTU / Q9FS88: 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum	25% id, 75% cov
More...

b4187: putative acyl coenzyme A dehydrogenase (VIMSS) is similar to:	PaperBLAST
Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	29% id, 84% cov
PfGW456L13_2983: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	32% id, 75% cov
PfGW456L13_2985: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	26% id, 91% cov
Pf6N2E2_1146: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	34% id, 70% cov
Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	34% id, 69% cov
PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	33% id, 70% cov
AO353_25680: 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) from Pseudomonas fluorescens	33% id, 70% cov
AO356_26355: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	33% id, 70% cov
AO353_25670: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 84% cov
PS417_13840: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	27% id, 83% cov
Pf1N1B4_4787: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	33% id, 70% cov
Ac3H11_2996: 2-methyl-branched-chain-enoyl-CoA reductase (EC 1.3.8.5) from Acidovorax sp.	29% id, 72% cov
SO1679: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Shewanella oneidensis	28% id, 74% cov
MBCD_SOLTU / Q9FS88: 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum	29% id, 67% cov
O16843: short-chain 2-methylacyl-CoA dehydrogenase (EC 1.3.8.5) from Ascaris suum	26% id, 70% cov
ACDSB_HUMAN / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Homo sapiens ACADSB / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) from Homo sapiens	24% id, 59% cov
ACDSB_RAT / P70584: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Rattus norvegicus Acadsb / P70584: 2-methyl branched chain acyl-CoA dehydrogenase subunit (EC 1.3.8.5) from Rattus norvegicus	23% id, 59% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory