Searching in Escherichia coli BW25113 (Keio)
Found 8 curated entries in PaperBLAST's database that match '1.3.8.6'.
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Escherichia coli BW25113, or try another query
b0039: crotonobetaine reductase subunit II, FAD-binding (NCBI) is similar to: | PaperBLAST |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 26% id, 94% cov |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 25% id, 95% cov |
GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa | 24% id, 90% cov |
b0221: putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) is similar to: | PaperBLAST |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 25% id, 95% cov |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 26% id, 91% cov |
GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa | 25% id, 70% cov |
b1695: putative oxidoreductase (VIMSS) is similar to: | PaperBLAST |
GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens | 26% id, 78% cov |
GCDH_MOUSE / Q60759: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Mus musculus | 24% id, 85% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1775142-1776365 (frame +3) on 7023 is similar to: | PaperBLAST |
GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens | 25% id, 86% cov |
Lawrence Berkeley National Laboratory