Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 2 curated entries in PaperBLAST's database that match '1.4.3.10' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Escherichia coli BW25113, or try another query

b1386: tyramine oxidase, copper-requiring (NCBI)
is similar to:
PaperBLAST

AO1 / O23349: copper-containing amine oxidase (EC 1.4.3.21; EC 1.4.3.10) from Arabidopsis thaliana

31% id,
97% cov

b3081: 2,4-dienoyl-CoA reductase, NADH and FMN-linked (NCBI)
is similar to:
PaperBLAST

puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea

26% id,
37% cov

b1699: predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI)
is similar to:
PaperBLAST

puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea

30% id,
20% cov

b2468: fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit (NCBI)
is similar to:
PaperBLAST

puo / P40974: putrescine oxidase subunit (EC 1.4.3.10) from Kocuria rosea

38% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory