Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 43 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Escherichia coli BW25113, or try another query

b1386: tyramine oxidase, copper-requiring (NCBI)
is similar to:
PaperBLAST

AMO_ECOLI / P46883: Primary amine oxidase; 2-phenylethylamine oxidase; Copper amine oxidase; Tyramine oxidase; EC 1.4.3.21 from Escherichia coli
MaoA / b1386: copper-containing amine oxidase (EC 1.4.3.21) from Escherichia coli
tynA / P46883: copper-containing amine oxidase (EC 1.4.3.21) from Escherichia coli

100% id,
100% cov

AMO_KLEM8 / P80695: Primary amine oxidase; Monamine oxidase; Tyramine oxidase; EC 1.4.3.21 from Klebsiella michiganensis

87% id,
100% cov

CAOG2_ARATH / Q9M2B9: Amine oxidase [copper-containing] gamma 2; AtCuAOgamma2; EC 1.4.3.21 from Arabidopsis thaliana

33% id,
93% cov

More...

b1301: gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding (NCBI)
is similar to:
PaperBLAST

AOFA_MOUSE / Q64133: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

35% id,
17% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

37% id,
16% cov

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

36% id,
16% cov

More...

b2241: sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI)
is similar to:
PaperBLAST

AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

32% id,
14% cov

b2766: orf, hypothetical protein (VIMSS)
is similar to:
PaperBLAST

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

41% id,
9% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

37% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory