Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 5 curated entries in PaperBLAST's database that match '1.4.3.25' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Escherichia coli BW25113, or try another query

b0043: predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI)
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

28% id,
34% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

44% id,
7% cov

b3081: 2,4-dienoyl-CoA reductase, NADH and FMN-linked (NCBI)
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

24% id,
33% cov

b2887: putative oxidoreductase, Fe-S subunit (VIMSS)
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

39% id,
12% cov

b2878: predicted oxidoreductase, Fe-S subunit (NCBI)
is similar to:
PaperBLAST

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

30% id,
12% cov

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

42% id,
9% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

49% id,
7% cov

b1699: predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI)
is similar to:
PaperBLAST

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

46% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory