Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 116 curated entries in PaperBLAST's database that match '2.3.1.9'.

These curated entries have 97 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Escherichia coli BW25113, or try another query

b2224: acetyl-CoA acetyltransferase (NCBI)
is similar to:
PaperBLAST

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli

100% id,
100% cov

P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

62% id,
100% cov

THIL_CUPNH / P14611: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator

61% id,
100% cov

More...

b2844: putative acyltransferase (VIMSS)
is similar to:
PaperBLAST

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

65% id,
100% cov

THIL_THIVI / P45363: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Thiocystis violacea

62% id,
100% cov

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

61% id,
99% cov

More...

b3845: acetyl-CoA acetyltransferase (NCBI)
is similar to:
PaperBLAST

fadA / Q88L01: FadA (EC 2.3.1.16; EC 2.3.1.9) from Pseudomonas putida

63% id,
99% cov

Q0KAI3: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Cupriavidus necator

44% id,
100% cov

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

44% id,
99% cov

More...

b1397: acetyl-CoA acetyltransferase (NCBI)
is similar to:
PaperBLAST

PfGW456L13_2411: Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pseudomonas fluorescens

47% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli

46% id,
100% cov

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

46% id,
100% cov

More...

b2342: acetyl-CoA acetyltransferase (NCBI)
is similar to:
PaperBLAST

THIL_CUPNH / P14611: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator

36% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli

36% id,
98% cov

THLA_SYNWW / Q0AVM3: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; EC 2.3.1.9 from Syntrophomonas wolfei

35% id,
100% cov

More...

b1095: 3-oxoacyl-(acyl carrier protein) synthase (NCBI)
is similar to:
PaperBLAST

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

25% id,
57% cov

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

29% id,
34% cov

THIL_THIVI / P45363: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Thiocystis violacea

30% id,
30% cov

More...

b1092: acyl carrier protein S-malonyltransferase (NCBI)
is similar to:
PaperBLAST

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

30% id,
9% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

31% id,
8% cov

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

29% id,
8% cov

b4051: quinone oxidoreductase, NADPH-dependent (NCBI)
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

32% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1148945-1149874 (frame +2) on 7023
is similar to:
PaperBLAST

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea
Also see hits to annotated proteins above

30% id,
9% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory