Searching in Escherichia coli BW25113 (Keio)
Found 35 curated entries in PaperBLAST's database that match '2.3.3.9' as complete word(s).
These curated entries have 22 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Escherichia coli BW25113, or try another query
| b4014: malate synthase (NCBI) is similar to: | PaperBLAST |
Mas / b4014: malate synthase A (EC 2.3.3.9) from Escherichia coli | 100% id, 100% cov |
SO1483: Malate synthase (EC 2.3.3.9) from Shewanella oneidensis | 68% id, 97% cov |
Q9ZH77: malate synthase (EC 2.3.3.9) from Streptomyces clavuligerus | 49% id, 98% cov |
| b2976: malate synthase (NCBI) is similar to: | PaperBLAST |
MASZ_ECOLI / P37330: Malate synthase G; MSG; EC 2.3.3.9 from Escherichia coli | 100% id, 100% cov |
Psest_0354: Malate synthase G (EC 2.3.3.9) from Pseudomonas stutzeri | 60% id, 99% cov |
MASZ_MYCLB / B8ZSN3: Malate synthase G; EC 2.3.3.9 from Mycobacterium leprae | 57% id, 99% cov |
| b4015: isocitrate lyase (NCBI) is similar to: | PaperBLAST |
GCP_CAEEL / Q10663: Bifunctional glyoxylate cycle protein; Gex-3-interacting protein 7; EC 4.1.3.1; EC 2.3.3.9 from Caenorhabditis elegans | 56% id, 45% cov |
| b0616: citrate lyase beta chain (acyl lyase subunit) (VIMSS) is similar to: | PaperBLAST |
CLYBL_HUMAN / Q8N0X4: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Homo sapiens | 25% id, 90% cov |
CLYBL_MOUSE / Q8R4N0: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus | 25% id, 91% cov |
| b0331: 2-methylisocitrate lyase (NCBI) is similar to: | PaperBLAST |
GCP_CAEEL / Q10663: Bifunctional glyoxylate cycle protein; Gex-3-interacting protein 7; EC 4.1.3.1; EC 2.3.3.9 from Caenorhabditis elegans | 30% id, 24% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 648811-649809 (frame -2) on 7023 is similar to: | PaperBLAST |
CLYBL_HUMAN / Q8N0X4: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Homo sapiens | 25% id, 97% cov |
Lawrence Berkeley National Laboratory