Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b3631: glucosyltransferase I (NCBI)
is similar to:
PaperBLAST

CAB38022.1: sucrose synthase (Ss2) (EC 2.4.1.13)

26% id,
25% cov

CAA57881.1: sucrose synthase (Css1) (EC 2.4.1.13)

26% id,
24% cov

CAA76057.1: sucrose synthase isoform II (Susy*Dc2) (EC 2.4.1.13)
O49845: sucrose synthase (EC 2.4.1.13) from Daucus carota

27% id,
24% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2113937-2115172 (frame -1) on 7023
is similar to:
PaperBLAST

SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea
CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13)
Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea

22% id,
32% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory