Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 3 curated entries in PaperBLAST's database that match '2.5.1.113' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Escherichia coli BW25113, or try another query

b2421: cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI)
is similar to:
PaperBLAST

CYSM_MYCTU / P9WP53: O-phosphoserine sulfhydrylase; OPS sulfhydrylase; CysO-thiocarboxylate-dependent cysteine synthase; Cysteine synthase B; CSase B; O-phosphoserine-specific cysteine synthase; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase; EC 2.5.1.113 from Mycobacterium tuberculosis
cysM / P9WP53: CysO-thiocarboxylate-dependent cysteine synthase monomer (EC 2.5.1.113) from Mycobacterium tuberculosis
P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

41% id,
94% cov

b2414: cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI)
is similar to:
PaperBLAST

CYSM_MYCTU / P9WP53: O-phosphoserine sulfhydrylase; OPS sulfhydrylase; CysO-thiocarboxylate-dependent cysteine synthase; Cysteine synthase B; CSase B; O-phosphoserine-specific cysteine synthase; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase; EC 2.5.1.113 from Mycobacterium tuberculosis
cysM / P9WP53: CysO-thiocarboxylate-dependent cysteine synthase monomer (EC 2.5.1.113) from Mycobacterium tuberculosis
P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

36% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory