Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 73 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 51 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Escherichia coli BW25113, or try another query

b2414: cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI)
is similar to:
PaperBLAST

CYSK_ECOLI / P0ABK5: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; S-carboxymethylcysteine synthase; Sulfate starvation-induced protein 5; SSI5; EC 2.5.1.47; EC 4.5.1.5 from Escherichia coli
Ssi5 / b2414: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1; EC 4.4.1.28) from Escherichia coli
cysK / P0ABK5: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1) from Escherichia coli
P0ABK5: cysteine synthase (EC 2.5.1.47) from Escherichia coli

100% id,
100% cov

CYSK_SALTY / P0A1E3: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; EC 2.5.1.47 from Salmonella typhimurium
P0A1E3: cysteine synthase (EC 2.5.1.47) from Salmonella enterica

97% id,
100% cov

P45040: cysteine synthase (EC 2.5.1.47) from Haemophilus influenzae

70% id,
99% cov

More...

b2421: cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI)
is similar to:
PaperBLAST

CYSM_ECOLI / P16703: Cysteine synthase B; CSase B; O-acetylserine (thiol)-lyase B; OAS-TL B; O-acetylserine sulfhydrylase B; EC 2.5.1.47 from Escherichia coli
CysM / b2421: cysteine synthase B (EC 2.5.1.47; EC 2.5.1.144; EC 4.4.1.1; EC 4.4.1.28) from Escherichia coli
cysM / P16703: cysteine synthase B (EC 2.5.1.47; EC 2.5.1.144; EC 4.4.1.1) from Escherichia coli
P16703: cysteine synthase (EC 2.5.1.47) from Escherichia coli

100% id,
100% cov

P29848: S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) (EC 2.5.1.144); cysteine synthase (EC 2.5.1.47) from Salmonella enterica

94% id,
100% cov

A2GMG5: cysteine synthase (EC 2.5.1.47) from Trichomonas vaginalis

44% id,
98% cov

More...

b3772: threonine dehydratase (NCBI)
is similar to:
PaperBLAST

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

28% id,
93% cov

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

27% id,
93% cov

CYSK1_CAEEL / Q93244: Cysteine synthase 1; O-acetylserine (thiol)-lyase 1; OAS-TL; EC 2.5.1.47 from Caenorhabditis elegans
Q93244: cysteine synthase (EC 2.5.1.47) from Caenorhabditis elegans

26% id,
93% cov

b3117: threonine dehydratase (NCBI)
is similar to:
PaperBLAST

CAS1_SOLTU / Q76MX2: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum

26% id,
81% cov

CAS2_SOLTU / Q9FS29: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum

26% id,
81% cov

CYSC1_ARATH / Q9S757: Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial; Beta-substituted Ala synthase 3;1; ARAth-Bsas3;1; Cysteine synthase C1; AtCYSC1; O-acetylserine (thiol)-lyase 5; EC 2.5.1.47; EC 4.4.1.9 from Arabidopsis thaliana

25% id,
79% cov

More...

b3939: cystathionine gamma-synthase (NCBI)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

31% id,
49% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

31% id,
40% cov

b2366: D-serine dehydratase (NCBI)
is similar to:
PaperBLAST

CYSK3_CAEEL / O01592: Cysteine synthase 3; O-acetylserine (thiol)-lyase 3; OAS-TL; EC 2.5.1.47 from Caenorhabditis elegans

24% id,
62% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3263067-3264074 (frame -3) on 7023
is similar to:
PaperBLAST

CAS1_SOLTU / Q76MX2: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum
Also see hits to annotated proteins above

26% id,
86% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory