Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Escherichia coli BW25113, or try another query

b3770: branched-chain amino acid aminotransferase (NCBI)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

100% id,
100% cov

b4054: tyrosine aminotransferase, tyrosine-repressible, PLP-dependent (NCBI)
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli
tyrB / P04693: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.1) from Escherichia coli

100% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

83% id,
100% cov

pat / Q5P8C9: aromatic-amino-acid aminotransferase (EC 2.6.1.1) from Aromatoleum aromaticum

65% id,
98% cov

More...

b0928: aspartate aminotransferase, PLP-dependent (NCBI)
is similar to:
PaperBLAST

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli

100% id,
100% cov

aspC / Q3IED5: aspartate aminotransferase (EC 2.6.1.1) from Pseudoalteromonas translucida

52% id,
99% cov

W0PFQ7: aspartate transaminase (EC 2.6.1.1) from Advenella mimigardefordensis

49% id,
99% cov

More...

b2379: hypothetical protein (NCBI)
is similar to:
PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

46% id,
97% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

37% id,
98% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

33% id,
98% cov

More...

b0600: putative aminotransferase (NCBI)
is similar to:
PaperBLAST

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

31% id,
97% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

30% id,
96% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

29% id,
96% cov

More...

b2290: aspartate aminotransferase (NCBI)
is similar to:
PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

30% id,
95% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

30% id,
95% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

29% id,
99% cov

More...

b2021: histidinol-phosphate aminotransferase (NCBI)
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

29% id,
99% cov

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

23% id,
80% cov

b1439: fused predicted DNA-binding transcriptional regulator/predicted amino transferase (NCBI)
is similar to:
PaperBLAST

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

23% id,
95% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

25% id,
80% cov

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

20% id,
80% cov

More...

b1622: bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI)
is similar to:
PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

23% id,
92% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

23% id,
90% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

23% id,
90% cov

More...

b4340: fused predicted DNA-binding transcriptional regulator/predicted aminotransferase (NCBI)
is similar to:
PaperBLAST

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

24% id,
81% cov

PAT_PETHY / E9L7A5: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida

23% id,
82% cov

tat / A0A0U1ZFM1: tyrosine aminotransferase (EC 2.6.1.1) from Prunella vulgaris

26% id,
68% cov

More...

b1096: 4-amino-4-deoxychorismate lyase (NCBI)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

24% id,
78% cov

b2253: uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq)
is similar to:
PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

29% id,
39% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

27% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory