Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 27 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b0907: phosphoserine aminotransferase (NCBI)
is similar to:

SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC from Escherichia coli
SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC; EC from Escherichia coli
serC: phosphoserine aminotransferase; EC from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC; EC from Escherichia coli

100% id,
100% cov

SERC_DROME / Q9VAN0: Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC from Drosophila melanogaster

50% id,
99% cov

V9NC98: phosphoserine transaminase (EC from Acanthamoeba castellanii

49% id,
97% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory