Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 114 curated entries in PaperBLAST's database that match '2.7.1.1' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Escherichia coli BW25113, or try another query

b2388: glucokinase (NCBI)
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

100% id,
100% cov

b3222: putative NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

35% id,
98% cov

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

35% id,
98% cov

Q7ZAH1: hexokinase (EC 2.7.1.1) from Thermoproteus tenax

32% id,
94% cov

More...

b1119: N-acetyl-D-glucosamine kinase (NCBI)
is similar to:
PaperBLAST

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

32% id,
98% cov

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

32% id,
98% cov

glk / Q9X1I0: glucokinase subunit (EC 2.7.1.1) from Thermotoga maritima

29% id,
96% cov

More...

b0394: possible NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

32% id,
95% cov

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

32% id,
95% cov

glcK / P54495: glucokinase (EC 2.7.1.1) from Bacillus subtilis

31% id,
96% cov

More...

b0676: DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI)
is similar to:
PaperBLAST

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

29% id,
97% cov

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

29% id,
97% cov

glcK / P54495: glucokinase (EC 2.7.1.1) from Bacillus subtilis

29% id,
97% cov

More...

b1594: DNA-binding transcriptional repressor (NCBI)
is similar to:
PaperBLAST

glcK / P54495: glucokinase (EC 2.7.1.1) from Bacillus subtilis

29% id,
97% cov

glk / Q8DVE8: glucokinase subunit (EC 2.7.1.1) from Streptococcus mutans

28% id,
86% cov

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

27% id,
69% cov

b2550: putative NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

glk / Q8DVE8: glucokinase subunit (EC 2.7.1.1) from Streptococcus mutans

28% id,
82% cov

glcK / P54495: glucokinase (EC 2.7.1.1) from Bacillus subtilis

27% id,
82% cov

glk / Q9X1I0: glucokinase subunit (EC 2.7.1.1) from Thermotoga maritima

28% id,
63% cov

More...

b4084: D-allose kinase (NCBI)
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

27% id,
82% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory