Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 15 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Escherichia coli BW25113, or try another query

b4268: D-gluconate kinase, thermosensitive (NCBI)
is similar to:
PaperBLAST

GntV / b4268: D-gluconate kinase, thermosensitive (EC 2.7.1.12) from Escherichia coli
idnK / GB|AAC77225.1: gluconokinase; EC 2.7.1.12 from Escherichia coli
idnK / P39208: D-gluconate kinase, thermosensitive (EC 2.7.1.12) from Escherichia coli

100% id,
100% cov

GntK / b3437: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli
gntK: gluconokinase; EC 2.7.1.12 from Escherichia coli
gntK / P46859: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli

47% id,
92% cov

BPHYT_RS16720: Gluconokinase (EC 2.7.1.12) from Burkholderia phytofirmans

45% id,
96% cov

More...

b3437: gluconokinase 2, thermoresistant (VIMSS)
is similar to:
PaperBLAST

GntK / b3437: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli
gntK: gluconokinase; EC 2.7.1.12 from Escherichia coli
gntK / P46859: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli

100% id,
100% cov

BPHYT_RS16720: Gluconokinase (EC 2.7.1.12) from Burkholderia phytofirmans

45% id,
96% cov

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

44% id,
95% cov

More...

b3390: shikimate kinase I (NCBI)
is similar to:
PaperBLAST

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

25% id,
98% cov

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

28% id,
44% cov

b3577: predicted transporter (NCBI)
is similar to:
PaperBLAST

Psest_2123: fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri

27% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory