Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 16 curated entries in PaperBLAST's database that match '2.7.1.147' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Escherichia coli BW25113, or try another query

b3222: putative NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

30% id,
99% cov

b1119: N-acetyl-D-glucosamine kinase (NCBI)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

29% id,
100% cov

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

31% id,
31% cov

b0394: possible NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

28% id,
100% cov

b4084: D-allose kinase (NCBI)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

25% id,
99% cov

b1594: DNA-binding transcriptional repressor (NCBI)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

25% id,
97% cov

b2550: putative NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

23% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory