Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 146 curated entries in PaperBLAST's database that match '2.7.1.15'.

These curated entries have 91 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Escherichia coli BW25113, or try another query

b1993: adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (NCBI)
is similar to:
PaperBLAST

CobU / b1993: cobinamide-P guanylyltransferase / cobinamide kinase (EC 2.7.7.62; EC 2.7.1.156) from Escherichia coli
cobU / RF|NP_416497: bifunctional adenosylcobalamin biosynthesis protein CobU; EC 2.7.1.156; EC 2.7.7.62 from Escherichia coli

100% id,
100% cov

COBU_SALTY / Q05599: Bifunctional adenosylcobalamin biosynthesis protein CobU; Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase; EC 2.7.1.156; EC 2.7.7.62 from Salmonella typhimurium
cobU / Q05599: adenosylcobinamide-phosphate guanylyltransferase subunit (EC 2.7.1.156; EC 2.7.7.62) from Salmonella typhimurium

82% id,
100% cov

cobP / P29931: CobP (EC 2.7.1.156; EC 2.7.7.62) from Sinorhizobium sp.

42% id,
95% cov

b3752: ribokinase (NCBI)
is similar to:
PaperBLAST

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

100% id,
100% cov

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

83% id,
100% cov

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

60% id,
98% cov

More...

b3883: putative kinase (VIMSS)
is similar to:
PaperBLAST

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

32% id,
98% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

31% id,
99% cov

AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

30% id,
98% cov

More...

b1772: putative kinase (VIMSS)
is similar to:
PaperBLAST

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

29% id,
95% cov

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

28% id,
95% cov

BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

25% id,
98% cov

More...

b1723: 6-phosphofructokinase II; suppressor of pfkA (VIMSS)
is similar to:
PaperBLAST

Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum

28% id,
90% cov

AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

26% id,
87% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

24% id,
92% cov

More...

b2166: predicted kinase (NCBI)
is similar to:
PaperBLAST

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

27% id,
92% cov

RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe

26% id,
92% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

26% id,
88% cov

More...

b2168: 1-phosphofructokinase (NCBI)
is similar to:
PaperBLAST

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

25% id,
99% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

25% id,
100% cov

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

25% id,
82% cov

More...

b3374: fructoselysine 6-kinase (NCBI)
is similar to:
PaperBLAST

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

30% id,
83% cov

AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

30% id,
83% cov

HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae

28% id,
84% cov

More...

b3052: fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI)
is similar to:
PaperBLAST

RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens
Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens

25% id,
94% cov

RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae

23% id,
97% cov

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

26% id,
78% cov

b2160: predicted kinase (NCBI)
is similar to:
PaperBLAST

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

25% id,
90% cov

b2100: predicted kinase (NCBI)
is similar to:
PaperBLAST

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

24% id,
90% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

33% id,
36% cov

BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

29% id,
40% cov

b3526: ketodeoxygluconokinase (VIMSS)
is similar to:
PaperBLAST

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

22% id,
84% cov

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

22% id,
69% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

34% id,
29% cov

More...

b0757: galactokinase (NCBI)
is similar to:
PaperBLAST

GALK2_HUMAN / Q01415: N-acetylgalactosamine kinase; GalNAc kinase; Galactokinase 2; EC 2.7.1.157 from Homo sapiens
Q01415: N-acetylgalactosamine kinase (EC 2.7.1.157) from Homo sapiens

30% id,
52% cov

b2914: ribose-5-phosphate isomerase A (NCBI)
is similar to:
PaperBLAST

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis

35% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory