Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 19 curated entries in PaperBLAST's database that match '2.7.1.165' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Escherichia coli BW25113, or try another query

b3124: glycerate kinase I (RefSeq)
is similar to:
PaperBLAST

GLXK1_ECOLI / P23524: Glycerate 2-kinase; Glycerate kinase 1; GK1; EC 2.7.1.165 from Escherichia coli
YhaD / b3124: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
garK / P23524: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
P23524: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

100% id,
100% cov

YbbZ / b0514: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
glxK / P77364: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
P77364: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

56% id,
99% cov

PS417_13970 / A0A1N7UI49: glycerate 2-kinase (EC 2.7.1.165) from Pseudomonas simiae

51% id,
93% cov

More...

b0514: glycerate kinase II (NCBI)
is similar to:
PaperBLAST

YbbZ / b0514: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
glxK / P77364: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
P77364: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

100% id,
100% cov

GLXK1_ECOLI / P23524: Glycerate 2-kinase; Glycerate kinase 1; GK1; EC 2.7.1.165 from Escherichia coli
YhaD / b3124: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
garK / P23524: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
P23524: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

56% id,
99% cov

PS417_13970 / A0A1N7UI49: glycerate 2-kinase (EC 2.7.1.165) from Pseudomonas simiae

50% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory