Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 37 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Escherichia coli BW25113, or try another query

b2388: glucokinase (NCBI)
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

100% id,
100% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

41% id,
100% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

30% id,
96% cov

b0394: possible NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

60% id,
100% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

59% id,
96% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

31% id,
96% cov

More...

b1119: N-acetyl-D-glucosamine kinase (NCBI)
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

42% id,
98% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

40% id,
95% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

33% id,
96% cov

More...

b3222: putative NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

35% id,
99% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

34% id,
97% cov

GLK_AERPE / Q9YA47: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Aeropyrum pernix

33% id,
96% cov

More...

b4084: D-allose kinase (NCBI)
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

29% id,
99% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Bacillus megaterium

27% id,
100% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

25% id,
98% cov

b1594: DNA-binding transcriptional repressor (NCBI)
is similar to:
PaperBLAST

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

29% id,
97% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

29% id,
97% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
94% cov

More...

b0676: DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI)
is similar to:
PaperBLAST

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

29% id,
97% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

29% id,
97% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Bacillus megaterium

32% id,
84% cov

More...

b2550: putative NAGC-like transcriptional regulator (VIMSS)
is similar to:
PaperBLAST

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

27% id,
82% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

27% id,
82% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Bacillus megaterium

28% id,
65% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory