Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 1 curated entries in PaperBLAST's database that match '2.7.1.229'.

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Escherichia coli BW25113, or try another query

b3752: ribokinase (NCBI)
is similar to:
PaperBLAST

deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

36% id,
99% cov

b3883: putative kinase (VIMSS)
is similar to:
PaperBLAST

deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

28% id,
99% cov

b2100: predicted kinase (NCBI)
is similar to:
PaperBLAST

deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

30% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory