Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 25 curated entries in PaperBLAST's database that match '2.7.1.30'.

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Escherichia coli BW25113, or try another query

b3926: glycerol kinase (NCBI)
is similar to:
PaperBLAST

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

100% id,
100% cov

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

74% id,
99% cov

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

64% id,
100% cov

More...

b3580: L-xylulose kinase (NCBI)
is similar to:
PaperBLAST

GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis
O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis

28% id,
96% cov

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

25% id,
95% cov

GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus

24% id,
99% cov

More...

b1511: putative kinase (VIMSS)
is similar to:
PaperBLAST

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

27% id,
95% cov

GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis
O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis

26% id,
97% cov

GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus

26% id,
97% cov

More...

b2803: L-fuculokinase (NCBI)
is similar to:
PaperBLAST

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

24% id,
96% cov

GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus

23% id,
96% cov

GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii

23% id,
95% cov

b3564: xylulokinase (NCBI)
is similar to:
PaperBLAST

SM_b21009: Glycerol kinase (EC 2.7.1.30) from Sinorhizobium meliloti

25% id,
89% cov

b2776: predicted kinase (NCBI)
is similar to:
PaperBLAST

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

23% id,
89% cov

b0063: ribulokinase (NCBI)
is similar to:
PaperBLAST

GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis

29% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory