Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 36 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Escherichia coli BW25113, or try another query

b3926: glycerol kinase (NCBI)
is similar to:		 PaperBLAST

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

 100% id,
100% cov

A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae

 93% id,
100% cov

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

 74% id,
99% cov

More...

b1511: putative kinase (VIMSS)
is similar to:		 PaperBLAST

A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae

 27% id,
99% cov

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

 27% id,
95% cov

P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis

 26% id,
98% cov

More...

b3580: L-xylulose kinase (NCBI)
is similar to:		 PaperBLAST

GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis
O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis

 28% id,
96% cov

A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae

 26% id,
94% cov

P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.

 27% id,
92% cov

More...

b3564: xylulokinase (NCBI)
is similar to:		 PaperBLAST

P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.

 25% id,
90% cov

SM_b21009: Glycerol kinase (EC 2.7.1.30) from Sinorhizobium meliloti

 25% id,
89% cov

b2803: L-fuculokinase (NCBI)
is similar to:		 PaperBLAST

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

 24% id,
96% cov

GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus

 23% id,
96% cov

GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii

 23% id,
95% cov

b2776: predicted kinase (NCBI)
is similar to:		 PaperBLAST

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

 23% id,
89% cov

b0063: ribulokinase (NCBI)
is similar to:		 PaperBLAST

GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis

 29% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory