Searching in Escherichia coli BW25113 (Keio)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Escherichia coli BW25113, or try another query
| b0003: homoserine kinase (NCBI) is similar to: | PaperBLAST |
KHSE_ECOLI / P00547: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli | 100% id, 100% cov |
Echvi_2001: homoserine kinase (EC 2.7.1.39) from Echinicola vietnamensis | 37% id, 89% cov |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 35% id, 89% cov |
| b3390: shikimate kinase I (NCBI) is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 35% id, 86% cov |
| b1208: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (NCBI) is similar to: | PaperBLAST |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 24% id, 91% cov |
| b0388: shikimate kinase II (NCBI) is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 27% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3516571-3517305 (frame -2) on 7023 is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 34% id, 90% cov |
Lawrence Berkeley National Laboratory