Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 13 curated entries in PaperBLAST's database that match '2.7.1.92' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Escherichia coli BW25113, or try another query

b3752: ribokinase (NCBI)
is similar to:
PaperBLAST

PGA1_c07240: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92) from Phaeobacter inhibens

27% id,
94% cov

BWI76_RS03085: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Klebsiella michiganensis

24% id,
51% cov

b3526: ketodeoxygluconokinase (VIMSS)
is similar to:
PaperBLAST

IOLC_BACSU / P42414: 5-dehydro-2-deoxygluconokinase; 2-deoxy-5-keto-D-gluconate kinase; DKG kinase; EC 2.7.1.92 from Bacillus subtilis
iolC / P42414: 5-dehydro-2-deoxy-D-gluconate kinase (EC 2.7.1.92) from Bacillus subtilis

27% id,
93% cov

PGA1_c07240: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92) from Phaeobacter inhibens

24% id,
91% cov

b1772: putative kinase (VIMSS)
is similar to:
PaperBLAST

IOLC_BACSU / P42414: 5-dehydro-2-deoxygluconokinase; 2-deoxy-5-keto-D-gluconate kinase; DKG kinase; EC 2.7.1.92 from Bacillus subtilis
iolC / P42414: 5-dehydro-2-deoxy-D-gluconate kinase (EC 2.7.1.92) from Bacillus subtilis

25% id,
96% cov

Pf6N2E2_512: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens

26% id,
51% cov

AO356_23160: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens

26% id,
51% cov

More...

b3374: fructoselysine 6-kinase (NCBI)
is similar to:
PaperBLAST

PGA1_c07240: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92) from Phaeobacter inhibens

26% id,
79% cov

AO356_23160: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens

25% id,
27% cov

IOLC_BACSU / P42414: 5-dehydro-2-deoxygluconokinase; 2-deoxy-5-keto-D-gluconate kinase; DKG kinase; EC 2.7.1.92 from Bacillus subtilis
iolC / P42414: 5-dehydro-2-deoxy-D-gluconate kinase (EC 2.7.1.92) from Bacillus subtilis

27% id,
25% cov

More...

b2166: predicted kinase (NCBI)
is similar to:
PaperBLAST

BWI76_RS03085: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Klebsiella michiganensis

23% id,
48% cov

PS417_11850: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas simiae

28% id,
15% cov

AO353_21335: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Pseudomonas fluorescens

27% id,
15% cov

More...

b3052: fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI)
is similar to:
PaperBLAST

iolC-DUF2090 / A0A0H3C6B4: bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase (EC 2.7.1.92; EC 4.1.2.29) from Caulobacter vibrioides
CCNA_01356: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Caulobacter crescentus

28% id,
29% cov

b3883: putative kinase (VIMSS)
is similar to:
PaperBLAST

IOLC_BACSU / P42414: 5-dehydro-2-deoxygluconokinase; 2-deoxy-5-keto-D-gluconate kinase; DKG kinase; EC 2.7.1.92 from Bacillus subtilis
iolC / P42414: 5-dehydro-2-deoxy-D-gluconate kinase (EC 2.7.1.92) from Bacillus subtilis

33% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3677079-3678365 (frame +3) on 7023
is similar to:
PaperBLAST

IOLC_BACSU / P42414: 5-dehydro-2-deoxygluconokinase; 2-deoxy-5-keto-D-gluconate kinase; DKG kinase; EC 2.7.1.92 from Bacillus subtilis
iolC / P42414: 5-dehydro-2-deoxy-D-gluconate kinase (EC 2.7.1.92) from Bacillus subtilis
Also see hits to annotated proteins above

26% id,
96% cov

PGA1_c07240: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92) from Phaeobacter inhibens
Also see hits to annotated proteins above

24% id,
93% cov

1854011-1855015 (frame -1) on 7023
is similar to:
PaperBLAST

IOLC_BACSU / P42414: 5-dehydro-2-deoxygluconokinase; 2-deoxy-5-keto-D-gluconate kinase; DKG kinase; EC 2.7.1.92 from Bacillus subtilis
iolC / P42414: 5-dehydro-2-deoxy-D-gluconate kinase (EC 2.7.1.92) from Bacillus subtilis
Also see hits to annotated proteins above

25% id,
98% cov

2256383-2257342 (frame -1) on 7023
is similar to:
PaperBLAST

BWI76_RS03085: 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) from Klebsiella michiganensis
Also see hits to annotated proteins above

23% id,
49% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory