Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 61 curated entries in PaperBLAST's database that match '2.7.2.1'.

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Escherichia coli BW25113, or try another query

b3115: propionate kinase/acetate kinase C, anaerobic (RefSeq)
is similar to:
PaperBLAST

TDCD_ECOLI / P11868: Propionate kinase; EC 2.7.2.15 from Escherichia coli
YhaA / b3115: propionate kinase (EC 2.7.2.7; EC 2.7.2.1; EC 2.7.2.15; EC 2.7.2.14) from Escherichia coli
tdcD / P11868: propionate kinase (EC 2.7.2.1) from Escherichia coli

100% id,
100% cov

TDCD_SALTY / O06961: Propionate kinase; EC 2.7.2.15 from Salmonella typhimurium
O06961: propionate kinase (EC 2.7.2.15) from Salmonella enterica

83% id,
100% cov

E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp.

47% id,
98% cov

More...

b1849: phosphoribosylglycinamide formyltransferase 2 (NCBI)
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15) from Escherichia coli

100% id,
100% cov

b2296: acetate kinase (NCBI)
is similar to:
PaperBLAST

ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC 2.7.2.1 from Escherichia coli
AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli
ackA / RF|NP_416799: acetate kinase; EC 2.7.2.1 from Escherichia coli
ackA / P0A6A3: acetate kinase (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
P0A6A3: acetate kinase (EC 2.7.2.1) from Escherichia coli

100% id,
100% cov

ACKA_SALTY / P63411: Acetate kinase AckA; Acetokinase; EC 2.7.2.1 from Salmonella typhimurium
P63411: acetate kinase (EC 2.7.2.1) from Salmonella enterica

98% id,
100% cov

E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp.

65% id,
99% cov

More...

b0242: gamma-glutamyl kinase (NCBI)
is similar to:
PaperBLAST

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

100% id,
100% cov

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

38% id,
97% cov

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

33% id,
100% cov

More...

b2460: hypothetical protein (NCBI)
is similar to:
PaperBLAST

EUTQ_SALTY / Q9ZFV5: Acetate kinase EutQ; Ethanolamine utilization protein EutQ; EC 2.7.2.1 from Salmonella typhimurium
eutQ / Q9ZFV5: acetate kinase (EC 2.7.2.15) from Salmonella typhimurium

88% id,
100% cov

EUTQ_CLOD6 / Q187N7: Acetate kinase EutQ; Ethanolamine utilization protein EutQ; EC 2.7.2.1 from Clostridioides difficile

34% id,
94% cov

b2461: conserved protein with nucleoside triphosphate hydrolase domain (NCBI)
is similar to:
PaperBLAST

EUTP_SALTY / P0A208: Probable acetate kinase EutP; Ethanolamine utilization protein EutP; EC 2.7.2.1 from Salmonella typhimurium
eutP / P0A208: acetate kinase EutP (EC 2.7.2.15) from Salmonella typhimurium

85% id,
100% cov

b3959: acetylglutamate kinase (RefSeq)
is similar to:
PaperBLAST

LYSZ_THET2 / O50147: [LysW]-aminoadipate kinase; EC 2.7.2.17 from Thermus thermophilus

26% id,
89% cov

b0243: gamma-glutamyl phosphate reductase (NCBI)
is similar to:
PaperBLAST

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

39% id,
56% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

37% id,
55% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

34% id,
54% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory