Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Escherichia coli BW25113, or try another query

b0242: gamma-glutamyl kinase (NCBI)
is similar to:

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC from Escherichia coli
proB: glutamate 5-kinase; EC from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC from Escherichia coli
P0A7B5: glutamate 5-kinase (EC from Escherichia coli

100% id,
100% cov

Q6E235: glutamate 5-kinase (EC from Bacillus subtilis

38% id,
97% cov

Ga0059261_3512: glutamate 5-kinase (EC from Sphingomonas koreensis

39% id,
96% cov


b0243: gamma-glutamyl phosphate reductase (NCBI)
is similar to:

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC; EC from Arabidopsis thaliana

39% id,
56% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC; EC from Oryza sativa

37% id,
55% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC; EC from Oryza sativa

34% id,
54% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory