Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 17 curated entries in PaperBLAST's database that match '3.1.1.25' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b3379: predicted hydrolase (NCBI)
is similar to:
PaperBLAST

Q4J6Z8: arylesterase (EC 3.1.1.2); 1,4-lactonase (EC 3.1.1.25); aryldialkylphosphatase (EC 3.1.8.1) from Sulfolobus acidocaldarius

33% id,
95% cov

C4KKZ9: arylesterase (EC 3.1.1.2); 1,4-lactonase (EC 3.1.1.25); aryldialkylphosphatase (EC 3.1.8.1) from Sulfolobus islandicus

32% id,
96% cov

Q97VT7: 1,4-lactonase (EC 3.1.1.25); quorum-quenching N-acyl-homoserine lactonase (EC 3.1.1.81); aryldialkylphosphatase (EC 3.1.8.1) from Saccharolobus solfataricus

31% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3505740-3506687 (frame -3) on 7023
is similar to:
PaperBLAST

Q4J6Z8: arylesterase (EC 3.1.1.2); 1,4-lactonase (EC 3.1.1.25); aryldialkylphosphatase (EC 3.1.8.1) from Sulfolobus acidocaldarius
Also see hits to annotated proteins above

32% id,
99% cov

C4KKZ9: arylesterase (EC 3.1.1.2); 1,4-lactonase (EC 3.1.1.25); aryldialkylphosphatase (EC 3.1.8.1) from Sulfolobus islandicus
Also see hits to annotated proteins above

31% id,
99% cov

Q97VT7: 1,4-lactonase (EC 3.1.1.25); quorum-quenching N-acyl-homoserine lactonase (EC 3.1.1.81); aryldialkylphosphatase (EC 3.1.8.1) from Saccharolobus solfataricus
Also see hits to annotated proteins above

30% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory