Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 46 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Escherichia coli BW25113, or try another query

b1767: cytoplasmic asparaginase I (NCBI)
is similar to:
PaperBLAST

ASPG1_ECOLI / P0A962: L-asparaginase 1; L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I; EC 3.5.1.1 from Escherichia coli
AnsA / b1767: L-asparaginase 1 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli

100% id,
100% cov

CA265_RS25090: L-asparaginase (EC 3.5.1.1) from Pedobacter sp.

43% id,
99% cov

AO356_11100: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

37% id,
97% cov

More...

b2957: periplasmic L-asparaginase II (NCBI)
is similar to:
PaperBLAST

ASPG2_ECOLI / P00805: L-asparaginase 2; L-asparaginase II; L-ASNase II; L-asparagine amidohydrolase II; Colaspase; EC 3.5.1.1 from Escherichia coli
AnsB / b2957: L-asparaginase 2 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli
P00805: asparaginase (EC 3.5.1.1) from Escherichia coli

100% id,
100% cov

Q66CJ2: asparaginase (EC 3.5.1.1) from Yersinia pseudotuberculosis

73% id,
100% cov

B6ZCD8: asparaginase (EC 3.5.1.1) from Helicobacter pylori
I0ZIE0: asparaginase (EC 3.5.1.1) from Helicobacter pylori

51% id,
100% cov

More...

b0828: L-asparaginase (NCBI)
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

100% id,
100% cov

CCNA_00096: asparaginase (EC 3.5.1.1) from Caulobacter crescentus

45% id,
93% cov

Q5JHT1: asparaginase (EC 3.5.1.1) from Thermococcus kodakarensis

41% id,
100% cov

More...

b0318: predicted transcriptional regulator with ankyrin domain (NCBI)
is similar to:
PaperBLAST

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

24% id,
30% cov

W0G253: asparaginase (EC 3.5.1.1) from Rhizomucor miehei

40% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory