Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 17 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Escherichia coli BW25113, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2658345-2659580 (frame -3) on 7023
is similar to:

BPHYT_RS16030: Kynureninase (EC from Burkholderia phytofirmans

27% id,
58% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory