Curated BLAST for Genomes


Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 4 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Escherichia coli BW25113, or try another query

b0349: 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (VIMSS)
is similar to:

G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC from Pseudomonas sp.

36% id,
97% cov

P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC from Pseudomonas fluorescens

35% id,
94% cov

XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC from Pseudomonas putida
xylF / P23106: 2-hydroxymuconic semialdehyde hydrolase (EC from Pseudomonas putida

34% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory