Searching in Escherichia coli BW25113 (Keio)
Found 56 curated entries in PaperBLAST's database that match '4.1.1.19'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Escherichia coli BW25113, or try another query
| b4117: biodegradative arginine decarboxylase (RefSeq) is similar to: | PaperBLAST |
ADIA_ECOLI / P28629: Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 100% id, 100% cov |
E8X9U7: arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica | 93% id, 100% cov |
Q5NT93: arginine decarboxylase (EC 4.1.1.19) from Selenomonas ruminantium | 27% id, 33% cov |
| b2938: arginine decarboxylase (NCBI) is similar to: | PaperBLAST |
SPEA_ECOLI / P21170: Biosynthetic arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 100% id, 100% cov |
Q8ZHG8: arginine decarboxylase (EC 4.1.1.19) from Yersinia pestis | 85% id, 100% cov |
Q7MK24: arginine decarboxylase (EC 4.1.1.19) from Vibrio vulnificus | 54% id, 100% cov |
| b4131: lysine decarboxylase 1 (NCBI) is similar to: | PaperBLAST |
ADIA_ECOLI / P28629: Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 36% id, 97% cov |
E8X9U7: arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica | 35% id, 97% cov |
Q5NT93: arginine decarboxylase (EC 4.1.1.19) from Selenomonas ruminantium | 35% id, 14% cov |
| b0186: lysine decarboxylase 2, constitutive (NCBI) is similar to: | PaperBLAST |
E8X9U7: arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica | 35% id, 97% cov |
ADIA_ECOLI / P28629: Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 35% id, 96% cov |
Q5NT93: arginine decarboxylase (EC 4.1.1.19) from Selenomonas ruminantium | 29% id, 27% cov |
| b2965: ornithine decarboxylase isozyme (VIMSS) is similar to: | PaperBLAST |
ADIA_ECOLI / P28629: Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 33% id, 87% cov |
E8X9U7: arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica | 34% id, 81% cov |
| b0693: ornithine decarboxylase isozyme, inducible (NCBI) is similar to: | PaperBLAST |
ADIA_ECOLI / P28629: Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli | 31% id, 94% cov |
E8X9U7: arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica | 31% id, 89% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory