Curated BLAST for Genomes

 

Curated BLAST

Searching in Escherichia coli BW25113 (Keio)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Escherichia coli BW25113, or try another query

b2097: orf, hypothetical protein (VIMSS)
is similar to:
PaperBLAST

ALF1_ECOLI / P0A991: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Escherichia coli
DhnA / b2097: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli
fbaB / P0A991: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli

100% id,
100% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

27% id,
94% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

25% id,
97% cov

More...

b2925: fructose-bisphosphate aldolase (NCBI)
is similar to:
PaperBLAST

ALF_ECOLI / P0AB71: Fructose-bisphosphate aldolase class 2; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II; Sedoheptulose bisphosphate aldolase; EC 4.1.2.13 from Escherichia coli
Fda / b2925: fructose-bisphosphate aldolase class II (EC 4.1.2.13) from Escherichia coli
fbaA / RF|NP_417400: fructose-bisphosphate aldolase class II; EC 4.1.2.13 from Escherichia coli
fbaA / P0AB71: fructose-bisphosphate aldolase class II (EC 4.1.2.13) from Escherichia coli

100% id,
100% cov

D0ZEE4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Vibrio anguillarum

88% id,
100% cov

A0KGD4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Aeromonas hydrophila

82% id,
99% cov

More...

b2096: tagatose-bisphosphate aldolase 1 (VIMSS)
is similar to:
PaperBLAST

Q5HE75: fructose-bisphosphate aldolase (EC 4.1.2.13) from Staphylococcus aureus

42% id,
100% cov

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

42% id,
100% cov

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

42% id,
100% cov

More...

b3137: tagatose 6-phosphate aldolase 1, kbaY subunit (NCBI)
is similar to:
PaperBLAST

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

42% id,
100% cov

ALF_THECA / Q703I2: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Thermus caldophilus

41% id,
99% cov

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

41% id,
100% cov

More...

b1773: predicted aldolase (NCBI)
is similar to:
PaperBLAST

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

42% id,
96% cov

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

42% id,
96% cov

Q9RHA2: fructose-bisphosphate aldolase (EC 4.1.2.13) from Thermus aquaticus

39% id,
96% cov

More...

b1517: hypothetical protein (NCBI)
is similar to:
PaperBLAST

aroA' / Q57843: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase monomer (EC 4.1.2.13; EC 2.2.1.10) from Methanocaldococcus jannaschii

33% id,
95% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

26% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory